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Martin Vejmelka

List of published articles, conference papers, book chapters, etc.

journal articles

  • M. Palus, D. Hartman, J. Hlinka, M. Vejmelka: Discerning connectivity from dynamics in climate networks, Nonlinear Processes in Geophysics 18(5): pp 751-763 (2011).
  • J. Hlinka, M. Palus, M. Vejmelka, D. Mantini and M. Corbetta: Functional connectivity in resting-state fMRI: Is linear correlation sufficient?, NeuroImage 54 (3): pp. 2218-2225 (2011).
  • M Vejmelka and M Palus. Inferring the directionality of coupling with conditional mutual information, Physical Review E 77 (2): Art. No. 026214 (2008) 
  • M Palus and M Vejmelka. Directionality of coupling from bivariate time series: How to avoid false causalities and missed connections, Physical Review E 75 (5): Art. No. 056211 Part 2 (2007) 
  • K Hlavackova-Schindler, M Palus, M Vejmelka and J Bhattachary. Causality detection based on information-theoretic approaches in time series analysis, Physics Reports - Review Section of Physics Letters 441 (1): 1-46 (2007). [preprint]
  • M Vejmelka, P Musilek, M Palus, E Pelikan. K-Means clustering for problems with periodic attributes.  International Journal of Pattern Recognition and Artificial Intelligence 23(4): 721-743 (2009)
  • M Vejmelka, M. Palus. Detecting nonlinear oscillations in broadband signals, Chaos 19: 015114 (2009). 
  • M. Vejmelka, M. Palus, W. T. Lee. Phase synchronization analysis by assessment of the phase difference gradient, Chaos 19: 023120 (2009) .
  • Teplan, M, Susmakova, K, Palus, M and Vejmelka, M. Phase Synchronization in Human EEG During Audio-Visual Stimulation. Electromagnetic Biology and Medicine 28(1): 80-84 (2009). [link]
  • M Vejmelka, M Palus and K Susmakova. Identification of nonlinear oscillatory activity embedded in broadband neural signals, Intl J Neural Systems 20(2):117-128 (2010).
  • M Vejmelka and M Palus. Partitioning networks into clusters and residuals with average association, Chaos 20:  033103 (2010).

book chapters

  • M Vejmelka, I Fründ and A. Pillai. Traversing Scales: Large Scale Simulation of the Cat Cortex Using Single Neuron Models. Lectures in Supercomputational Neuroscience: Dynamics in Complex Brain Networks. Berlin : Springer-Verlag, 2008 - (Graben, P.; Zhou, C.; Thiel, M.; Kurths, J.) S. 331-342. ISBN 978-3-540-73158-0. - (Understanding Complex Systems) Springer

presentations and conference papers

  • M Vejmelka and K Schindler-Hlavackova, Mutual Information Estimation in Higher Dimensions: A Speed-Up of a k-Nearest Neighbor Based Estimator, In Adaptive and Natural Computing Algorithms: 8th International Conference, ICANNGA 2007, Warsaw, Poland, LNCS 4431, p. 790
  • M Vejmelka, Causality estimation from bivariate time series, [presentation], HPC-Europa Transnational Access Meeting 2007, Bologna, Italy


  • Poster "Resting state network detection by graph partitioning using the Average Association criterion" presented at the 16th Annual Meeting of the Organization for Human Brain Mapping